BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F03SP1|AL425402
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1791 1811 0.0
>3x_Contig1791
Length = 39945
Score = 1811 bits (908), Expect = 0.0
Identities = 933/945 (98%), Gaps = 3/945 (0%)
Strand = Plus / Minus
Query: 17 catctcatttctcaaaggtattgcaatattacacgattgtaaagatgggtagaaagtatc 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1878 catctcatttctcaaaggtattgcaatattacacgattgtaaagatgggtagaaagtatc 1819
Query: 77 acactttaccatgctaaggcccgtcagtattrawgamttaatawcaracacagttcctgc 136
||||||||||||||||||||||||||||||| | || |||||| || |||||||||||||
Sbjct: 1818 acactttaccatgctaaggcccgtcagtattgatgacttaatatcagacacagttcctgc 1759
Query: 137 gaagaaacctcggtttctgatcaagaaacgaacatttccacaaccagaagaagaagaagc 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1758 gaagaaacctcggtttctgatcaagaaacgaacatttccacaaccagaagaagaagaagc 1699
Query: 197 gtcaaargcattgtcacacaccgttatcaagaggaaagataattataggaatctcgacga 256
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1698 gtcaaaggcattgtcacacaccgttatcaagaggaaagataattataggaatctcgacga 1639
Query: 257 agacgaactatacgaggaacaagtatctaatgaaccagatgatttactattcctagcaag 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1638 agacgaactatacgaggaacaagtatctaatgaaccagatgatttactattcctagcaag 1579
Query: 317 aaaatccgccgaccttttgaagaaacgacaaaatgaagatgaaagtattgtcgacaatta 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1578 aaaatccgccgaccttttgaagaaacgacaaaatgaagatgaaagtattgtcgacaatta 1519
Query: 377 cttggggaagcattggtctgaaaagaaatatgaagagatgagcactagggattggaggat 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1518 cttggggaagcattggtctgaaaagaaatatgaagagatgagcactagggattggaggat 1459
Query: 437 tctatctgaagactttaatatctcgagtaaaggtggaacagtagagaaacctctaagaaa 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1458 tctatctgaagactttaatatctcgagtaaaggtggaacagtagagaaacctctaagaaa 1399
Query: 497 ctggcacgaattaaagttaattccggaagatttgttaaacattattacaaatrawttgca 556
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 1398 ctggcacgaattaaagttaattccggaagatttgttaaacattattacaaatgatttgca 1339
Query: 557 ctacaacgagccaacatccattcagcgcagtacaataccgaatgttataaacaatagaga 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1338 ctacaacgagccaacatccattcagcgcagtacaataccgaatgttataaacaatagaga 1279
Query: 617 cttcattggtgttgctagtactggttctggtaagacacttgcatttttgcttccaattct 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1278 cttcattggtgttgctagtactggttctggtaagacacttgcatttttgcttccaattct 1219
Query: 677 tataaaacttcacggtataccgccacttaattcaattactaaacatgatggtcctttggc 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1218 tataaaacttcacggtataccgccacttaattcaattactaaacatgatggtcctttggc 1159
Query: 737 attagtattagcaccaacaagagaattggcacagcaaatacaacatgaggggcaatcaat 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1158 attagtattagcaccaacaagagaattggcacagcaaatacaacatgaggggcaatcaat 1099
Query: 797 tacgaaactatggaaacgaccttgcaatatcgtaagtattgttggtggacattccttgga 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1098 tacgaaactatggaaacgaccttgcaatatcgtaagtattgttggtggacattccttgga 1039
Query: 857 agaaatttcagcaaacctaagagatggatgtgatatattggttgctacacccggggaagg 916
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1038 agaaatttcagcaaacctaagagatggatgtgatatattggttgctacaccc--ggaagg 981
Query: 917 ttacttgatttgtctagattctcatcttttatttttaaagcragt 961
|||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 980 ttacttga-ttgtctagattctcatcttttatttttaaagcaagt 937
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8191
Number of Sequences: 1807
Number of extensions: 8191
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)